BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B04LP1|AL430341
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1044 1732 0.0
3x_Contig720 155 2e-37
3x_Contig587 155 2e-37
3x_Contig1798 149 1e-35
3x_Contig848 145 2e-34
3x_Contig1 139 1e-32
3x_Contig1347 137 4e-32
3x_Contig1020 137 4e-32
3x_Contig537 109 9e-24
>3x_Contig1044
Length = 4552
Score = 1732 bits (873), Expect = 0.0
Identities = 884/887 (99%), Gaps = 1/887 (0%)
Strand = Plus / Minus
Query: 1 gatcccaaaatgcaagtaattcctgaagttgcgagccgataccatcgcagctacaagcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4007 gatcccaaaatgcaagtaattcctgaagttgcgagccgataccatcgcagctacaagcgt 3948
Query: 61 agtgccaatccctatttccagctcaaattccgctcgcagtctcttctcatctccactagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3947 agtgccaatccctatttccagctcaaattccgctcgcagtctcttctcatctccactagt 3888
Query: 121 aatctctctctctattctgcaaggcacgccacagttttagatatgaaaagtttgaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3887 aatctctctctctattctgcaaggcacgccacagttttagatatgaaaagtttgaatatt 3828
Query: 181 ttgcagcctaaagagagagcgagaaaggaaaggaaacagtagtgaagtaacaagaggata 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3827 ttgcagcctaaagagagagcgagataggaaaggaaacagtagtgaagtaacaagaggata 3768
Query: 241 aggaggagaaacttcgatattgtaaaactgttaggttgtgcgtcagtatgtgcaagatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 aggaggagaaacttcgatattgtaaaactgttaggttgtgcgtcagtatgtgcaagatta 3708
Query: 301 gctcagtggtcattattagctttcacttttaagtaattatatttctatttatctgattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3707 gctcagtggtcattattagctttcacttttaagtaattatatttctatttatctgattga 3648
Query: 361 gaagggagatagggaaaaaataaagccctgtggggggctcgaacccccaaccttgtgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3647 gaagggagatagggaaaaaataaagccctgtggggggctcgaacccccaaccttgtgatt 3588
Query: 421 aagagtcacacgcgctaccgattgcgccaacaaggcattaagatgctacaagagcgcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3587 aagagtcacacgcgctaccgattgcgccaacaaggcattaagatgctacaagagcgcatt 3528
Query: 481 tttcttctctatgacttagatgcaatatcatttttttctattcatccgtatccagcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 tttcttctctatgacttagatgcaatatcatttttttctattcatccgtatccagcatct 3468
Query: 541 ttcttactgacggtttaaacaaatcgaagtgagatgatatcgtgcccgtaccctcaattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 ttcttactgacggtttaaacaaatcgaagtgagatgatatcgtgcccgtaccctcaattg 3408
Query: 601 gtctaacattcagtcaccttctgatcaacccttccccagtaatctagtcattgctacttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3407 gtctaacattcagtcaccttctgatcaacccttccccagtaatctagtcattgctacttc 3348
Query: 661 tcacttgtttcattattacgcatttaaaaaagcattgagggtattctatgatttcccttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3347 tcacttgtttcattattacgcatttaaaaaagcattgagggtattctatgatttcccttg 3288
Query: 721 tacaagcaagataactgcacaagtttggaaacgaaggtacgcacagaagaaagacaacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3287 tacaagcaagataactgcacaagtttggaaacgaaggtacgcacagaagaaagacaacct 3228
Query: 781 accagcaagtgtgcacttttaaaactatgtcattagttaaaaaagagccaggttctacca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 accagcaagtgtgcacttttaaaactatgtcattagttaaaaaagagccaggttctacca 3168
Query: 841 cagagtcatcttgttggtcttctggtgg-acgtcagawaaatctgct 886
|||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 3167 cagagtcatcttgttggtcttctggtggaacgtcagataaatctgct 3121
>3x_Contig720
Length = 2178
Score = 155 bits (78), Expect = 2e-37
Identities = 81/82 (98%)
Strand = Plus / Minus
Query: 376 aaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 435
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 aaaaagaaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 1397
Query: 436 taccgattgcgccaacaaggca 457
||||||||||||||||||||||
Sbjct: 1396 taccgattgcgccaacaaggca 1375
>3x_Contig587
Length = 1528
Score = 155 bits (78), Expect = 2e-37
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 375 aaaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 434
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 aaaaaagaaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 234
Query: 435 ctaccgattgcgccaacaaggc 456
||||||||||||||||||||||
Sbjct: 235 ctaccgattgcgccaacaaggc 256
>3x_Contig1798
Length = 38968
Score = 149 bits (75), Expect = 1e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 382 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31958 aaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccga 32017
Query: 442 ttgcgccaacaaggc 456
|||||||||||||||
Sbjct: 32018 ttgcgccaacaaggc 32032
>3x_Contig848
Length = 3091
Score = 145 bits (73), Expect = 2e-34
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 372 gggaaaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacac 431
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gggaaaaaagaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacac 1057
Query: 432 gcgctaccgattgcgccaacaaggc 456
|||||||||||||||||| ||||||
Sbjct: 1058 gcgctaccgattgcgccagcaaggc 1082
>3x_Contig1
Length = 735
Score = 139 bits (70), Expect = 1e-32
Identities = 79/82 (96%)
Strand = Plus / Minus
Query: 375 aaaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcg 434
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaaaaacaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcg 220
Query: 435 ctaccgattgcgccaacaaggc 456
||||||||||||||| ||||||
Sbjct: 219 ctaccgattgcgccagcaaggc 198
>3x_Contig1347
Length = 6130
Score = 137 bits (69), Expect = 4e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 376 aaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 435
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4649 aaaaagaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 4708
Query: 436 taccgattgcgccaacaaggc 456
|||||||||||||| ||||||
Sbjct: 4709 taccgattgcgccagcaaggc 4729
>3x_Contig1020
Length = 4879
Score = 137 bits (69), Expect = 4e-32
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 376 aaaaataaagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 435
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 aaaaagaaagccctgcggggggctcgaacccccaaccttgtgattaagagtcacacgcgc 3600
Query: 436 taccgattgcgccaacaaggc 456
|||||||||||||| ||||||
Sbjct: 3601 taccgattgcgccagcaaggc 3621
>3x_Contig537
Length = 3151
Score = 109 bits (55), Expect = 9e-24
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 383 aagccctgtggggggctcgaacccccaaccttgtgattaagagtcacacgcgctaccgat 442
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3019 aagccctgcggggggctcgaacccc-aaccttgtgattaagagtcacacgcgctaccgat 3077
Query: 443 tgcgcca 449
|||||||
Sbjct: 3078 tgcgcca 3084
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6270
Number of Sequences: 1807
Number of extensions: 6270
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 9
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)